PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PK09803.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Cannabis
Family MYB_related
Protein Properties Length: 91aa    MW: 10225 Da    PI: 10.8364
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PK09803.1genomeCCBRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding33.11.3e-105351446
                     HHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding 14 davkqlGggtWktIartmgkgRtlkqcksrwqk 46
                     ++++  G++ W+ Ia+ ++ gRt++++k++w++
        PK09803.1  5 KLHAAIGSR-WSMIAQQLP-GRTDNDVKNYWNT 35
                     578889999.*********.***********97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129415.85141IPR017930Myb domain
Gene3DG3DSA:1.10.10.601.0E-15549IPR009057Homeodomain-like
SuperFamilySSF466896.16E-10547IPR009057Homeodomain-like
PfamPF002492.5E-8535IPR001005SANT/Myb domain
CDDcd001672.52E-71337No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 91 aa     Download sequence    Send to blast
LFRSKLHAAI GSRWSMIAQQ LPGRTDNDVK NYWNTKLRKK LSEMGIDPVT HKPFSQIIAD  60
YGNVGGLPKT GMRIGSLNKD LKNAILMKMD P
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007099739.11e-49Duplicated homeodomain-like superfamily protein, putative
SwissprotQ9XHV08e-27MYB80_ARATH; Transcription factor MYB80
TrEMBLS1SMA01e-49S1SMA0_THECC; Duplicated homeodomain-like superfamily protein, putative
STRINGVIT_17s0000g05400.t011e-46(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF29423474
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56110.14e-28myb domain protein 103